Anastasia Stolyarova

Research advisor: G. A. Bazykin

Program entry year: 2017

Graduated from Moscow State University (Faculty of Bioengineering and Bioinformatics) in 2017

Research project: Causes of fitness landscape changes

Research interests: fitness landscapes, the role of epistasis in evolution, population genetics

Publications:

• Senescence and entrenchment in evolution of amino acid sites. A. V. Stolyarova, E. Nabieva, V. V. Ptushenko, A. V. Favorov, A. V. Popova, A. D. Neverov, G. A. Bazykin Nature Comm. 2020
•  Staying on top of a wave in a fitness seascape: Allele-specific nonstationarity in evolution of influenza A virus surface proteins. A. Popova, K. Safina, V. Ptushenko, A. Stolyarova, A. Favorov, A. Neverov, G. Bazykin. PNAS 2019 
• Bursts of amino acid replacements in protein evolution. A. V. Stolyarova, G. A. Bazykin, T. V. Neretina, A. S. Kondrashov. Royal Society Open Science 2019
• A Coarse-Grained Model for DNA Origami. R. V. Reshetnikov, A. V. Stolyarova, A. O. Zalevsky, D. Y. Panteleev, G. V. Pavlova, D. V. Klinov, A. V. Golovin, A. D. Protopopova. Nucleic Acids Res. 2018

Conference presentations:

• Within-gene epistatic selection shapes polymorphism in natural populations of the world’s most variable eukaryotic species. A. V. Stolyarova, A. S. Kondrashov, G. A. Bazykin. EMBL: Molecular Mechanisms of Evolution&Ecology 2020 Oral presentation
• Prevalent epistatic interactions between amino acid sites in S. commune. A. V. Stolyarova, A. S. Kondrashov, G. A. Bazykin. MCCMB (Moscow Conference on Computational Molecular Biology), Moscow 2019  Oral presentation
• Epistatic interactions in protein evolution of S. commune. A. V. Stolyarova, A. S. Kondrashov, G. A. Bazykin. ITaS (Information technologies and systems), Perm 2019  Oral presentation
• Prevalent epistatic interactions between amino acid sites in S. commune. A. V. Stolyarova, A. S. Kondrashov, G. A. Bazykin. SMBE (Society for Molecular Biology & Evolution), Manchester UK, 2019  Poster presentation
• Causes of single position fitness landscape changes. A. V. Stolyarova, E. R. Nabieva, V. V. Ptushenko, G. A. Bazykin. ITaS (Information technologies and systems), Kazan 2018  Poster presentation
• Bursts of nonsynonymous replacements in protein evolution. A. V Stolyarova, G. A. Bazykin, T. V. Neretina, A. S. Kondrashov. SMBE  (Society for Molecular Biology & Evolution), Yokohama 2018 Poster presentation
• Causes of single position fitness landscape changes. A. V. Stolyarova, E. R. Nabieva, V. V. Ptushenko, G. A. Bazykin. ITaS   (Information technologies and systems). Ufa 2017 Oral presentation
• Causes of single position fitness landscape changes. A. V. Stolyarova, E. R. Nabieva, V. V. Ptushenko, G. A. Bazykin. Gen-Y, Sochi 2017  Poster presentation
• Causes of single position fitness landscape changes. A. V. Stolyarova, E. R. Nabieva, V. V. Ptushenko, G. A. Bazykin. MCCMB (Moscow Conference on Computational Molecular Biology), Moscow 2017 Poster presentation
• Causes of single position fitness landscape changes. A. V. Stolyarova, E. R. Nabieva, V. V. Ptushenko, G. A. Bazykin. SMBE (Society for Molecular Biology & Evolution), Austin 2017 Poster presentation